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Genomics information
| Species |
Scientific Name |
UCSC Version |
Ensembl Genome Assembly |
GenBank assembly accession |
Chromosome Size |
Total #Ensembl Genes |
| Human |
Homo sapiens |
hg19 |
GRCh37.p13 |
GCA_000001405.14 |
3,326 Mbp |
64,102 |
| Mouse |
Mus musculus |
mm10 |
GRCm38.p2 |
GCA_000001635.4 |
3,482 Mbp |
39,179 |
| Rat |
Rattus norvegicus |
rn5 |
Rnor_5.0 |
GCA_000001895.3 |
2,909 Mbp |
26,405 |
| Chimpanzee |
Pan troglodytes |
panTro4 |
CHIMP2.1.4 |
GCA_000001515.4 |
2,995 Mbp |
28,012 |
| Chicken |
Gallus gallus |
galGal4 |
Galgal4 |
GCA_000002315.2 |
1,072 Mbp |
17,108 |
| Frog |
Xenopus tropicalis |
xenTro3 |
JGI 4.2 |
GCA_000004195.1 |
1,358 Mbp |
19,921 |
| Fruitfly |
Drosophila melanogaster |
dm3 |
BDGP5 |
GCA_000001215.1 |
168 Mbp |
13,937 |
| Yeast |
Saccharomyces cerevisiae |
sacCer3 |
R64-1-1 |
GCA_000146045.2 |
12 Mbp |
7,126 |
RLFS statistics
| Organism |
#predicted RLFS |
#RLFS in genic and proximal regions |
#merged RLFS in genic and proximal regions |
% RLFS on genic and proximal regions |
#RLFS in Upstream |
#RLFS in Gene |
#RLFS in Downstream |
| Human |
664,791 |
511,651 |
169,222 |
76.96 |
207,282 |
464,019 |
118,082 |
| Mouse |
575,403 |
304,288 |
118,333 |
52.88 |
77,521 |
274,748 |
38,311 |
| Rat |
454,018 |
191,228 |
91,114 |
42.12 |
36,510 |
164,207 |
14,815 |
| Chimpanzee |
530,728 |
302,726 |
111,708 |
57.04 |
67,770 |
259,223 |
28,375 |
| Chicken |
213,942 |
146,292 |
47,326 |
68.38 |
55,502 |
111,537 |
29,113 |
| Frog |
319,296 |
104,939 |
25,910 |
32.87 |
20,474 |
11,642 |
80,662 |
| Fruitfly |
5,947 |
4,597 |
3,120 |
77.30 |
1,030 |
4,058 |
825 |
| Yeast |
78 |
74 |
33 |
94.87 |
70 |
22 |
45 |
